Insertion junction: CLIP2.018166_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.018166
Chromosome:chromosome 3
Location:1139975
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g149001 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGTGAGCACGACGTGCATTCCTGTCCTTGTAGAAACCTAGGCCCGGG
Internal bar code:CCTTATGATGTGTAGCACGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4573
LEAP-Seq percent confirming:20.8333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CAGACAACAAGCAACCAGGC
Suggested primer 2:CTCAAATCTCTCGCGCTTGC