Insertion junction: CLIP2.018178_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.018178
Chromosome:chromosome 17
Location:5691370
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g740430 (1 of 1) IPR003663//IPR005828//IPR011701//IPR020846 - Sugar/inositol transporter // Major facilitator, sugar transporter-like // Major facilitator superfamily // Major facilitator superfamily domain intron
Cre17.g802121 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAACAATGGCAGCAACAGGAGGGCGACGCCAGTGCCAGCTGTGGTGTA
Internal bar code:ATAGTGCCTGGGGGCGCGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:521
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTGTCTACAACCCCACC
Suggested primer 2:TGGAGCAGTTCGTGGAGTTC