Insertion junction: CLIP2.018185_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.018185
Chromosome:chromosome 1
Location:5633538
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g040250 DNJ9 DnaJ-like protein; (1 of 2) PTHR15606//PTHR15606:SF3 - DNAJ HOMOLOG SUBFAMILY C MEMBER 8/LIPOPOLYSACCHARIDE SPECIFIC RESPONSE-7-RELATED // GPALPP MOTIFS-CONTAINING PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGGCACGGATTTGCCGTTTGGGCCTCCGCGTGTCGATCCGCCTCGGTC
Internal bar code:GGGAGGACGACCTACGGCTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2890
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCCATCCTCGTCGTCATCTG
Suggested primer 2:CGGCCGAAAGTCATCTGAGA