Insertion junction: CLIP2.018187_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.018187
Chromosome:chromosome 17
Location:1495718
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g706800 (1 of 1) PTHR11080//PTHR11080:SF34 - PYRAZINAMIDASE/NICOTINAMIDASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTTCCTCTCCCCAGCCCGTGCCTCTCCCCAGCCCCTCCCCAGTCCCCA
Internal bar code:CGGGTCACACAGGTTTGTAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1198
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGACGACTACCGGGAACT
Suggested primer 2:AATGTAATGGACTGCCCGGG