Insertion junction: CLIP2.018187_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.018187
Chromosome:chromosome 17
Location:1495723
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g706800 (1 of 1) PTHR11080//PTHR11080:SF34 - PYRAZINAMIDASE/NICOTINAMIDASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGCGTGAGGCCTGTAGATGCAGACCAGACGCAGGCGAGGCGGGGCGC
Internal bar code:CGGGTCACACAGGTTTGTAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:613
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AATGTAATGGACTGCCCGGG
Suggested primer 2:TCTGACGACTACCGGGAACT