Insertion junction: CLIP2.018189_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.018189
Chromosome:chromosome 6
Location:8754472
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g310800 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCCGCTGCTGCCTCGCTCGGTGTCTGTGTGGACGTGGTGGTGGTGGT
Internal bar code:CTGGTACCCCCACCCGTACTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2712
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GTACCGTCAGCACTCTGTCC
Suggested primer 2:GTCTTCCTCCTCGTCCTCCT