Insertion junction: CLIP2.018200_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.018200
Chromosome:chromosome 16
Location:5356351
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683500 HEL64 (1 of 1) K14778 - ATP-dependent RNA helicase DDX49/DBP8 [EC:3.6.4.13] (DDX49, DBP8); DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGAATGCCGACGGTACGCATACATGAGCGCAAGTGGAGGCAGCCCTT
Internal bar code:AGTTTCACTATGCGTTCTATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:389
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGCCCAAACTGAACCAA
Suggested primer 2:ATTGATACTAAGGGGCGCCG