Insertion junction: CLIP2.018210_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.018210
Chromosome:chromosome 2
Location:5305858
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g113050 (1 of 2) PTHR23344:SF28 - GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATACCAGTATACCACTCACGGCATACAAGTGTAAGGTCGGCTCGGGG
Internal bar code:GGGTAAAATAGAGAGTATTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3429
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:TGATCATGTCCAAACCCGCA
Suggested primer 2:AGGTTGGCGTAGTTCGGAAG