Insertion junction: CLIP2.018222_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.018222
Chromosome:chromosome 2
Location:3997105
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g102750 (1 of 2) PTHR31646:SF1 - ALPHA-1,2-MANNOSYLTRANSFERASE MNN2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCATGCTCAGTCCTGCACTCCTGCTTGGGAATGCTGATAACAATGCCT
Internal bar code:CATCCAAGGCCCGTAGCGATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1773
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAAGTACCAGCCCGTCAG
Suggested primer 2:CGTTTGCGTACGGTATGCTG