Insertion junction: CLIP2.018226_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.018226
Chromosome:chromosome 2
Location:3395066
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g098500 (1 of 12) PF04749 - PLAC8 family (PLAC8) intron
Cre02.g098550 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGACTGACGGGACGCACGCATTCGTGCGGCTCCCACACGCTCATCCAG
Internal bar code:GTGGCCTCATGCAGAGCTCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3000
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:CGGAAGGACATACCGTACCG
Suggested primer 2:GGTTGCTGGTCTGTCCATGA