Insertion junction: CLIP2.018227_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.018227
Chromosome:chromosome 1
Location:5375873
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g038000 (1 of 1) K16196 - eukaryotic translation initiation factor 2-alpha kinase 4 (EIF2AK4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCACACACACGTGACTGTACACACACGCGAACCGCACACACACACACAC
Internal bar code:AGTAATAGACATACTACGATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1626
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AAACCACTTGCCTCACACCA
Suggested primer 2:ATGGTGGTTGTGGTGGTTGT