Insertion junction: CLIP2.018230_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.018230
Chromosome:chromosome 10
Location:6652000
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g466250 PRP20 (1 of 1) K14554 - U3 small nucleolar RNA-associated protein 21 (UTP21, WDR36); Putative Utp21 subunit of U3 snoRNP intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTGTGTGTGTGTGTCGAGGGGCGGTTGGTGACCGGTGTGCGTGTGT
Internal bar code:CGCAAGCTATACTTACTCAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1732
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAGTACTAGGGAGGGGCA
Suggested primer 2:CTACTGCTCCTGCTACAGCC