Insertion junction: CLIP2.018234_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.018234
Chromosome:chromosome 6
Location:5548465
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g287000 (1 of 1) PTHR31495//PTHR31495:SF0 - FAMILY NOT NAMED // PEROXYGENASE 1-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGGTGGGTGTGGCGCGGTGGGGCCAGGAGGATGCTATGCCGAGGTTCG
Internal bar code:CACAATAACTGAATACGGTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:701
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAAAGGCAGATGAGGCAT
Suggested primer 2:GCCTACTCCTTGCGCTCTAG