Insertion junction: CLIP2.018239_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.018239
Chromosome:chromosome 16
Location:2113073
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g657800 CCD3,CCD2 (1 of 2) K00464 - all-trans-8'-apo-beta-carotenal 15,15'-oxygenase (diox1); Carotenoid cleavage dioxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCGGCTGGTACTTACAAACTCCCCCTGGACCCTCTTATTTTTCTTCGC
Internal bar code:AGCACGCCAGGAGGGTGCGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4766
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGCAAGACAAGCAGCAGC
Suggested primer 2:TGAGCGGCAAAATGTGGTTG