Insertion junction: CLIP2.018239_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.018239
Chromosome:chromosome 16
Location:2113074
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g657800 CCD3,CCD2 (1 of 2) K00464 - all-trans-8'-apo-beta-carotenal 15,15'-oxygenase (diox1); Carotenoid cleavage dioxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAACCAAATCAAACGAGAGAGCAGGCCCTCAATCCAATGCAGCGCGAAT
Internal bar code:GTCTTCAGGGCTCCCAGTGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1678
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:113
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:113

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGCGGCAAAATGTGGTTG
Suggested primer 2:ATTGCAAGACAAGCAGCAGC