Insertion junction: CLIP2.018243_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.018243
Chromosome:chromosome 2
Location:4722320
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g108250 (1 of 2) PF02696 - Uncharacterized ACR, YdiU/UPF0061 family (UPF0061) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGGTGACGCGGCGCACTGCGTCGCTGGTGGCGGCGTGGCAGTGTGTGG
Internal bar code:ACGTGGGAGGCGGGCCCGAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1574
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GCTATGCAAATGTGGGCGAG
Suggested primer 2:GGGTTTCTGGAGGGTTGGAG