Insertion junction: CLIP2.018254_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.018254
Chromosome:chromosome 12
Location:5734387
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532350 CAV8 (1 of 2) PF00520//PF08016 - Ion transport protein (Ion_trans) // Polycystin cation channel (PKD_channel); Voltage-gated Ca2+ channel, alpha subunit CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCACGCAACATTCCCTCCACCCGCACCGACAGCGAGGCCGTGGGCGGC
Internal bar code:GCGTTATACCATATGTTGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1057
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCGCCAAGAGCCTATCCG
Suggested primer 2:AGCAATGCCTAGGCTGCTAG