Insertion junction: CLIP2.018260_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.018260
Chromosome:chromosome 6
Location:3590284
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278129 (1 of 1) PTHR13068//PTHR13068:SF30 - CGI-12 PROTEIN-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTCCACCGCCTTGTTGGGCAGCGCCAGCAGCAGCGGGCACCGCGCTAC
Internal bar code:TAACGAGTTAGGTGGGGCTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1129
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GAATTCGTGTCGGCATTCGG
Suggested primer 2:CGTGTGTGCGCATATGAGTG