Insertion junction: CLIP2.018262_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.018262
Chromosome:chromosome 3
Location:2310454
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g157900 (1 of 1) PTHR18937//PTHR18937:SF162 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGCGCACCTACCAACATTCAGGGGGAGTTTGCGGTATGGATGCTGGCT
Internal bar code:CTAGGATATATGAAAGAAGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2331
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCACTGCAACGTGTTAA
Suggested primer 2:CGCCGCTGATATCCAGTCTT