Insertion junction: CLIP2.018269_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.018269
Chromosome:chromosome 13
Location:1950536
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576250 (1 of 1) K15202 - general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) (GTF3C5, TFC1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGATCAAGGGAGCACCCCGTCTGCCGCTGCGGCTGTAGCTGTGTGTGTA
Internal bar code:AGGGAAGGGTTCTCCCCTATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:820
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGCCCTAGAAGCATGTG
Suggested primer 2:TTTGAGGTGGCGTGTAGGAC