Insertion junction: CLIP2.018277_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.018277
Chromosome:chromosome 3
Location:2859178
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g162333 (1 of 3) IPR000104//IPR003439//IPR003593//IPR013525//IPR027417 - Antifreeze protein, type I // ABC transporter-like // AAA+ ATPase domain // ABC-2 type transporter // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTAATTAAGAAGTGAAGTCGTAGGGGGGGTGGAATAGATGAGGCGCAC
Internal bar code:TCCTTGAAGGCCAAAAATGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:901
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTATCCCCTCCAACCCTC
Suggested primer 2:TTTGTGTGGATGGGATGGGG