Insertion junction: CLIP2.018280_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.018280
Chromosome:chromosome 7
Location:4863752
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g800842 (1 of 30) PF00078//PF03372 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Endonuclease/Exonuclease/phosphatase family (Exo_endo_phos) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACGGTGGACCGCTCTTTTCTGCTCGCGTGCCTGGAGCGCATGGGCGTG
Internal bar code:GCTCGTAATCACATGAGGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4221
LEAP-Seq percent confirming:3.77358
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:51
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GTAACTGGTGGGGAGAGTGC
Suggested primer 2:CGCGTGATTGCCAAGTTGAA