Insertion junction: CLIP2.018281_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.018281
Chromosome:chromosome 8
Location:4046393
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382750 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGGAGCTAGTAGGTTGTGGAGCTGCTATCTAACACAGGATAGGCCGGC
Internal bar code:TTTATGATTTCTTAAGCGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2656
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCGCTCATGTTTGCTAC
Suggested primer 2:GGGTTCGTCGGCTTCATGG