Insertion junction: CLIP2.018282_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.018282
Chromosome:chromosome 2
Location:179539
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g074370 CDPK8 Calcium/calmodulin-dependent protein kinase; (1 of 18) K13412 - calcium-dependent protein kinase (CPK) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGCTCCTGCGCGGCCTAACGTGTCTTTGCCCTCGCCCTCCGCCTCCA
Internal bar code:TGTCGTGGTGCGCTGGAATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:105
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GACCAGTACCGGTATCAGCG
Suggested primer 2:AACTGCTACCACCTTGACGG