Insertion junction: CLIP2.018286_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.018286
Chromosome:chromosome 9
Location:153334
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386732 (1 of 1) 2.4.1.57 - Phosphatidylinositol alpha-mannosyltransferase / Phosphatidyl-myo-inositol alpha-mannosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGACTGTTAGGCGGGCCAGTGGCACGTACACCTGTATGTGGACCCCAC
Internal bar code:GCTTGTAGATCGGATTTCGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1601
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGCCTTGTTGTCGTACTT
Suggested primer 2:AGCTCAACTCCACTGTGACG