Insertion junction: CLIP2.018299_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.018299
Chromosome:chromosome 1
Location:3638087
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g023650 Probable amino acid/metabolite permease; (1 of 4) PTHR11785:SF367 - AMINO-ACID PERMEASE BAT1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGTGGGTTGGTTTGGGCTTGTCAGGGTTGGAAGTTGGGAGGTGGAG
Internal bar code:TCGCCCCTGACATTCATAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1048
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CACTCATGCGCAAACACACA
Suggested primer 2:CGTTTGGCGGTCTTTCGTTT