Insertion junction: CLIP2.018321_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.018321
Chromosome:chromosome 17
Location:148467
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g696900 STK20,STPK20 (1 of 2) IPR000719//IPR001229//IPR001245//IPR002290//IPR011009//IPR016187//IPR020635 - Protein kinase domain // Jacalin-like lectin domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // C-type lectin fold // Tyrosine-protein kinase, catalytic domain; Serine/threonine protein kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACATAGTCAGGATCCGAGTGGAACCACATGACAGCTGCGCGCATAGGT
Internal bar code:AAGAACACTTTCCGATAAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4418
LEAP-Seq percent confirming:76.7442
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:GAATACATACCGACCGGCGT
Suggested primer 2:CTGTCTGGCTTACTGCTGCT