Insertion junction: CLIP2.018325_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.018325
Chromosome:chromosome 9
Location:1344779
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400450 (1 of 55) PTHR23257//PTHR23257:SF394 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACTCCTCCCTGGCCGCCGCCTCCATCGGGGCGCAGTCAAGCTGGGCCT
Internal bar code:GTTGTATGCGTAACATGGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1971
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCGTTGACCGTTGCGTTC
Suggested primer 2:ACACACACCAACCCCCAAAT