Insertion junction: CLIP2.018340_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.018340
Chromosome:chromosome 2
Location:6393335
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388100 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAACGGCCGCCGCAGCGGCGGCAAAGGCAGAGGAGGGGCGATCCGGCG
Internal bar code:TTTGCCACAGCCATCGGGCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1533
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCCATATCGAGTGCGGTA
Suggested primer 2:CGCGTTGTTGATGCTGTTGA