Insertion junction: CLIP2.018345_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.018345
Chromosome:chromosome 8
Location:1562687
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g365351 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCGCAGCCGCCACAACAACACATGATCCCACGGGCGCCCTAGTCGCC
Internal bar code:ATAGGAATACGATAGGATTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:1633
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTGTGACAAACTCCCGCA
Suggested primer 2:GCCTGAATGTCGATGTGCAC