Insertion junction: CLIP2.018348_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.018348
Chromosome:chromosome 7
Location:2421420
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g328900 CDPK3,CDPK9 (1 of 6) PTHR24349//PTHR24349:SF23 - SERINE/THREONINE-PROTEIN KINASE // MAP KINASE-ACTIVATED PROTEIN KINASE 5; Calcium/calmodulin-dependent protein kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCGGCGTCAGGTGCTGGCCGATGACCATGAGACATGCCTTCTTGAGCT
Internal bar code:CCAAGAACAAAAGTACAAAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1502
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGCATTTGTGCAGCATGG
Suggested primer 2:GGCGATAAGAAGTGCATGCG