Insertion junction: CLIP2.018349_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.018349
Chromosome:chromosome 7
Location:3539624
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336350 (1 of 1) PTHR24012//PTHR24012:SF432 - FAMILY NOT NAMED // HEPHAESTUS CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAAGAACTTGCAGCCCGTGACTGGACCGAATGGCCTAAATAGTACTTC
Internal bar code:GGTTTCTTTTAGGTGAGTGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2092
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:TGACATCTGCTCTTGTGCGT
Suggested primer 2:AGTGTGTGTTGTGAAGGGCA