Insertion junction: CLIP2.018350_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.018350
Chromosome:chromosome 3
Location:5541745
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185150 (1 of 11) IPR023109 - Integrase/recombinase, N-terminal intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCGATACACGACAGGCCACCCCGTGCCGGGTGATGCAGTATGAACCAT
Internal bar code:TGGACATGCACCTTAAGCGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2314
LEAP-Seq percent confirming:96.4912
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGGACTTCGTACTGCCC
Suggested primer 2:ACCCCCAACCAAATTCCGTT