Insertion junction: CLIP2.018352_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.018352
Chromosome:chromosome 9
Location:1239900
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400850 CTL4 (1 of 1) PTHR10877//PTHR10877:SF139 - POLYCYSTIN-RELATED // SUBFAMILY NOT NAMED; carbohydrate-binding protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGTCCGCCAATGCCGGCGCCTTCTGCTGGCGGCAGTCGGCGCCCTGGA
Internal bar code:CCAAAGAATACTACCTGAAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3622
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:123
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:123

Suggested primers for confirmation by PCR

Suggested primer 1:AAATGATTTGGGGCGGTTGC
Suggested primer 2:ATGCCGTATGTGTGACTGCA