Insertion junction: CLIP2.018353_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.018353
Chromosome:chromosome 10
Location:1501152
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428678 GID1,MNMG1,MNMG (1 of 1) K03495 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme (gidA, mnmG, MTO1); tRNA uridine 5-carboxymethylaminomethyl modification enzyme intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAAGTGCGAACCCACCCAAACCCAACCCATTGCCGCAACGTTGTTGGA
Internal bar code:GGTCCGGAAAGCTTGGCAGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1219
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCCTCGTAGTCGGACATG
Suggested primer 2:GCGCGTCTAACCCCTTATCA