Insertion junction: CLIP2.018359_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.018359
Chromosome:chromosome 8
Location:3040528
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g375200 (1 of 1) K07870 - Ras homolog gene family, member T1 (RHOT1, ARHT1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAAAACAAGGGTTTGCGGATTGGTTACTATTCGAGTAATGAGATTATT
Internal bar code:TTAGTTATGGCGAACAGGATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:635
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTCGTGATGAGGGCGTA
Suggested primer 2:GTCGGCACTCCCAACTTGTA