Insertion junction: CLIP2.018363_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.018363
Chromosome:chromosome 16
Location:6985091
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g672609 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTAGCCCAGACGCCCGAAAGTCTGAGCCGGCGCCAGGATCGCCGAAGCT
Internal bar code:GAACTCCTTGCAGGTTGTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1893
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTCGACAATGGTCCATGG
Suggested primer 2:GCAATAAGCTCAGCACTCGC