Insertion junction: CLIP2.018366_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.018366
Chromosome:chromosome 6
Location:3294859
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g277350 HDA13 RPD3/HDA1 type histone deacetylase; (1 of 4) K06067 - histone deacetylase 1/2 (HDAC1_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTTCATCCACCCGAGACACGCCCGCGCACCTCGATAGTGTGTTGAACT
Internal bar code:TGATAGGTGTCGTATGTCCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:456
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGGATGGACAGGTTGAAGGG
Suggested primer 2:CACCTCAAGCCGTACACACT