Insertion junction: CLIP2.018369_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.018369
Chromosome:chromosome 12
Location:3089098
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g501100 TMU3,TRM2A (1 of 1) 2.1.1.189//2.1.1.190 - 23S rRNA (uracil(747)-C(5))-methyltransferase // 23S rRNA (uracil(1939)-C(5))-methyltransferase / RNA uridine methyltransferase A; tRNA (uracil-5-)-methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCGGGCGCGGCGGTGGACGGGGCGGCGGACGCGGCGGCGGCGGACGC
Internal bar code:GTCATACTAACCGAATCAACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2267
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTTGGCCAGCACCTTCTC
Suggested primer 2:CTCTACTTTGTGGTGGCGGT