Insertion junction: CLIP2.018378_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.018378
Chromosome:chromosome 12
Location:5889053
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533500 (1 of 7) PF00211//PF13416 - Adenylate and Guanylate cyclase catalytic domain (Guanylate_cyc) // Bacterial extracellular solute-binding protein (SBP_bac_8) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGCCCCCGCCCCCGCCCCCGCCAGTACGGATGGCAGTGAGGGCGCGGC
Internal bar code:CCGAGGTTGCGCGGCGCTAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1047
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ATTACCTGCACCTGGACAGC
Suggested primer 2:CTAGTGCTGTCAGGTGGTCC