Insertion junction: CLIP2.018381_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.018381
Chromosome:chromosome 12
Location:3753394
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g514250 HLM17 (1 of 1) PF08429 - PLU-1-like protein (PLU-1); Histone-lysine N-methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGCCGGCGGCAGCGGCCGGCGCTGGTACGCGGTGCCGGCGGCGGCGCA
Internal bar code:GAGTTAGCACGGCAATGTGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:227
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGCGCGTATTACAAGCCA
Suggested primer 2:CCCGCTTGTGACTGAACTCT