Insertion junction: CLIP2.018393_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.018393
Chromosome:chromosome 2
Location:1089578
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g080550 PDE26 (1 of 1) PF00012//PF00233 - Hsp70 protein (HSP70) // 3'5'-cyclic nucleotide phosphodiesterase (PDEase_I); 3'%252C5'-cyclic-nucleotide phosphodiesterase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACAGCGTGGCCGGGCCGACTACGGGCGGCGGGCCGCCGTCATCCAGCG
Internal bar code:GTGTAGAGAGACGAGTCAGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1371
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGGATGTGGTCATAGAGG
Suggested primer 2:AGGCTCGTACGGAATGTGTG