Insertion junction: CLIP2.018398_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.018398
Chromosome:chromosome 2
Location:568600
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g076987 (1 of 10) PTHR31867//PTHR31867:SF1 - FAMILY NOT NAMED // EXPANSIN-A1-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATAGAATCGGAAAGGGACTGCAGCTGCATGTTCCACGACGCATCATGG
Internal bar code:GTGACTGGTCTACAGCTGAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1303
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGATGTGAGTGCCACCT
Suggested primer 2:GGAGACTCTACCCCTGACGT