Insertion junction: CLIP2.018399_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.018399
Chromosome:chromosome 11
Location:2098478
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467751 (1 of 4) K06067 - histone deacetylase 1/2 (HDAC1_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTTGTAACTTACGGCGCGTCCACGGCCGCGTTCCCTTGCCTCACCGCT
Internal bar code:ATAGTTTTGAAGGTCCCACGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:763
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TTCACCACCGAGCTGTACAC
Suggested primer 2:GCATCACCAACACCAACACC