Insertion junction: CLIP2.018399_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.018399
Chromosome:chromosome 11
Location:2098478
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467751 (1 of 4) K06067 - histone deacetylase 1/2 (HDAC1_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATTACGGGTGTGAGTTCCCACCGACTAGGCAAGCTGGCAACAGGTCCG
Internal bar code:CGAGTTCGTCGCAGAGGAATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:427
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCATCACCAACACCAACACC
Suggested primer 2:TTCACCACCGAGCTGTACAC