Insertion junction: CLIP2.018403_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.018403
Chromosome:chromosome 16
Location:4826215
Confidence (%):40
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00094023

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCGAAACGAAAGGTCGTTCCCGCTCAAGGGAAAAGTGGGCTGCGCCCA
Internal bar code:CGTCATTAATGCGAGGACCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:362
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTTGACGGCGTTGCTAGC
Suggested primer 2:CGTCTCACTTGTGGTCGTCA