Insertion junction: CLIP2.018417_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.018417
Chromosome:chromosome 11
Location:840117
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467642 (1 of 2) PTHR27000:SF119 - LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM2-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCACAAACTTCCACATGCCCGACATGGCGCTGAACGGCCCACTGCCCA
Internal bar code:ACTTTTCATGGCCTAGGGTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1593
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTCAAACAGCGCCAAAGC
Suggested primer 2:TTCCGGCAGATGAACCTTCC