Insertion junction: CLIP2.018419_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.018419
Chromosome:chromosome 5
Location:104916
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g800507 (1 of 10) 3.1.4.46 - Glycerophosphodiester phosphodiesterase / Glycerophosphoryl diester phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGTAGAGAACAAAACACACACGTAGTTAGCCCCACATACCGTAATCCT
Internal bar code:GGTATCATAAGTAAATAAGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:173
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCCTCGTCCTCCTCTTG
Suggested primer 2:CCCTTTCACTCACACCCCTC