Insertion junction: CLIP2.018438_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.018438
Chromosome:chromosome 4
Location:46392
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214097 (1 of 1) 3.2.1.162 - Lambda-carrageenase / Endo-beta-1,4-carrageenose 2,6,2'-trisulfate-hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGATGGCTGTCTCCCCCCCTCCCGCCTGTACCTCCCTGCCTGCGTGGG
Internal bar code:TTAAGCGGGCGGCGAGACTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:285
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGAACTGAGTGCGACTGG
Suggested primer 2:TTTCTCCAACGCCCAGGATC