Insertion junction: CLIP2.018438_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.018438
Chromosome:chromosome 4
Location:46393
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214097 (1 of 1) 3.2.1.162 - Lambda-carrageenase / Endo-beta-1,4-carrageenose 2,6,2'-trisulfate-hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAACGGAGCGATTCAGGGGTGAGAGGAGACAGTGGAGTGGGGGAGCCG
Internal bar code:TTAAGCGGGCGGCGAGACTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1666
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCTCCAACGCCCAGGATC
Suggested primer 2:ATGGAACTGAGTGCGACTGG